Information for 9-GGTTSTAATTATC (Motif 9)

A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C
Reverse Opposite:
A C T G T C G A A C G T C G T A C G T A A C G T A C G T T C G A A T C G C G T A C T G A A G T C A G T C
p-value:1e-14
log p-value:-3.226e+01
Information Content per bp:1.826
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 23.2bp
Average Position of motif in Background48.4 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0031.1_Hoxa3_1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGTTSTAATTATC
TGGAGGTAATTAAC
 A C G T A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C
C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C

Dlx1/MA0879.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GGTTSTAATTATC
---CCTAATTATC
 A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C
A C G T A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

MEOX1/MA0661.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GGTTSTAATTATC
---GCTAATTAAC
 A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C
A C G T A C G T A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGTTSTAATTATC----
NNNGGTAATTATNGNGN
 A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

GBX1/MA0889.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGTTSTAATTATC
---ACTAATTAGC
 A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C
A C G T A C G T A C G T T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C

VSX2/MA0726.1/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GGTTSTAATTATC
----CTAATTAG-
 A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C
A C G T A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G A C G T

HESX1/MA0894.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGTTSTAATTATC
---NCCAATTANC
 A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C
A C G T A C G T A C G T C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C

VSX1/MA0725.1/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GGTTSTAATTATC
----CTAATTAT-
 A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C
A C G T A C G T A C G T A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGTTSTAATTATC----
GTCGGTAATTATNGNGN
 A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

EMX2/MA0886.1/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGTTSTAATTATC
---NCTAATTANN
 A C T G A C T G A G C T G C A T T A G C A G C T C G T A C G T A C G A T A C G T G T C A A C G T A G T C
A C G T A C G T A C G T T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C