Information for 12-CAGTAATTGA (Motif 22)

A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
Reverse Opposite:
G A C T A T G C G T C A G C T A A G C T G C A T C G T A A G T C A C G T C T A G
p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.833
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif100.7
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets51.6 +/- 24.0bp
Average Position of motif in Background49.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX1/MA0666.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CAGTAATTGA
--NTAATTGG
 A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAGTAATTGA
CACTAATT--
 A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAGTAATTGA
--NTAATTGG
 A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

Dlx4/MA0881.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAGTAATTGA
--NTAATTGN
 A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

Dlx3/MA0880.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAGTAATTGA
--NTAATTGN
 A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

DLX6/MA0882.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAGTAATTGA
--NTAATTGN
 A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

MF0010.1_Homeobox_class/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAGTAATTGA
-AATAATT--
 A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAGTAATTGA
--NTAATTGN
 A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
A C G T A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.70
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTAATTGA
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CAGTAATTGA
--NTAATTGN
 A G T C C G T A A C T G A C G T C G T A T C G A C G A T A C G T A T C G C T G A
A C G T A C G T A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G