Information for 14-YTGCTATTAMAKT (Motif 16)

A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T
Reverse Opposite:
C G T A G T A C A C G T A C T G A C G T C G T A C G T A C G A T C G T A A C T G A T G C C G T A C T G A
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.848
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 23.6bp
Average Position of motif in Background35.6 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:YTGCTATTAMAKT
-NGCAATTAAA--
 A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T
A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YTGCTATTAMAKT
-NNCAATTANN--
 A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T
A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:YTGCTATTAMAKT
-----ATTAAA--
 A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:YTGCTATTAMAKT-
--CCTTTTATAGNC
 A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

BARX1/MA0875.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:YTGCTATTAMAKT
--GCAATTAG---
 A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T
A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:YTGCTATTAMAKT
--CCAATTAA---
 A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T
A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-YTGCTATTAMAKT---
ACGGCCATAAAATTAAT
 A C G T A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

GSX2/MA0893.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:YTGCTATTAMAKT
-ACTAATTAAA--
 A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T
A C G T G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YTGCTATTAMAKT---
-TNGAATTTCATTNAN
 A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Nkx2-5/MA0063.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:YTGCTATTAMAKT
---CAATTAA---
 A G C T C G A T A T C G A G T C A C G T C G T A A C G T A C G T C G T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T