Information for 6-TTTGTRATGA (Motif 7)

A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A
Reverse Opposite:
G A C T T A G C C G T A C A G T G A C T C G T A A T G C G C T A C G T A C T G A
p-value:1e-10
log p-value:-2.308e+01
Information Content per bp:1.700
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif407.1
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets47.6 +/- 27.0bp
Average Position of motif in Background48.5 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEOX2/MA0706.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTTGTRATGA--
--AGTAATTAAC
 A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A A C G T A C G T
A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

PH0061.1_Hoxb6/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTGTRATGA----
TATTGGTAATTACCTT
 A C G T A C G T A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A A C G T A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TTTGTRATGA
--GKTAATGR
 A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTRATGA--
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

VAX2/MA0723.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTTGTRATGA-
---NTAATTAG
 A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A A C G T
A C G T A C G T A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTRATGA---
GTNTTGTTGTGANNT
 A C G T A C G T A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

HOXA2/MA0900.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTTGTRATGA--
--GNTAATTANN
 A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A A C G T A C G T
A C G T A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TTTGTRATGA-
-----CATGAC
 A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

EVX1/MA0887.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTTGTRATGA--
--GNTAATTANN
 A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A A C G T A C G T
A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

MEOX1/MA0661.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTGTRATGA--
--GCTAATTAAC
 A G C T C G A T C G A T A T C G G C A T C T G A G T C A A C G T A T C G C T G A A C G T A C G T
A C G T A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C