Information for 5-GCGGAGCTCTCCCTCG (Motif 6)

A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G
Reverse Opposite:
G T A C A C T G C T G A C T A G C T A G A C T G C G T A A C T G C G T A A C T G A G T C A C G T G T A C A G T C A C T G A G T C
p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.6 +/- 15.0bp
Average Position of motif in Background79.2 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCTCTCCCTCG
-CGGAGC---------
 A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCGGAGCTCTCCCTCG
-----GCTCGGSCTC-
 A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GCGGAGCTCTCCCTCG-
------NCTTCCCGCCC
 A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCGGAGCTCTCCCTCG
----KGCCCTTCCCCA
 A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G
A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GCGGAGCTCTCCCTCG
------NYTTCCCGCC
 A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGCTCTCCCTCG
RGKGGGCGGAGC---------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCGGAGCTCTCCCTCG------
--GGAGCTGTCCATGGTGCTGA
 A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCGGAGCTCTCCCTCG-
--NNAATTCTCGNTNAN
 A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G A C G T
A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCGGAGCTCTCCCTCG-------
--GGCGCTGTCCATGGTGCTGAA
 A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GCGGAGCTCTCCCTCG-
------NNTTCCCGCCC
 A C T G A G T C T A C G A C T G C G T A A C T G A G T C C G A T A G T C A C G T A G T C A G T C A G T C A G C T A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C