Information for 6-CTGCTCCCGGAGG (Motif 3)

A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A G T C T A C G A C T G A C T G C G T A A C T G A G T C C G T A A C T G
p-value:1e-13
log p-value:-3.055e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.7 +/- 30.0bp
Average Position of motif in Background48.8 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGCTCCCGGAGG
--GCTCCG-----
 A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTGCTCCCGGAGG
CNGTCCTCCC-----
 A C G T A C G T A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGCTCCCGGAGG
CTGTTCCTGG---
 A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGCTCCCGGAGG
---TTCCNGGAAG
 A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G
A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGCTCCCGGAGG---
-CCCCCCCGGGGGGGT
 A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G A C G T A C G T A C G T
A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGCTCCCGGAGG---
-CCCCCCCGGGGGGGT
 A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G A C G T A C G T A C G T
A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGCTCCCGGAGG--
-CACCCCCGGGGGGG
 A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTCCCGGAGG
TKCTGTTCCA-----
 A C G T A C G T A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTGCTCCCGGAGG
NCCACTTCCGG---
 A C G T A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGCTCCCGGAGG----
--ATTCCCTGAGGGGAA
 A G T C C G A T A C T G A G T C A C G T A G T C A G T C A G T C A C T G A C T G G T C A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A