Information for 5-TTTTCAGCACCAG (Motif 3)

C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G
Reverse Opposite:
A G T C C G A T C T A G A C T G A C G T A C T G A G T C A C G T A C T G C G T A G T C A C G T A C G T A
p-value:1e-38
log p-value:-8.819e+01
Information Content per bp:1.825
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.01%
Number of Background Sequences with motif65.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets42.9 +/- 18.0bp
Average Position of motif in Background47.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCAGCACCAG
SCTGTCARCACC--
 A C G T C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTTCAGCACCAG-----
-NNTNCGCACCTGTNGAN
 C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TTTTCAGCACCAG--
-----AACACCTGCT
 C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TTTTCAGCACCAG--
-----TACACCTGTC
 C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TTTTCAGCACCAG--
-----CGCACCTGCT
 C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTTCAGCACCAG
-TTGCAACATN--
 C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TTTTCAGCACCAG---
----SNGCACCTGCHS
 C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

REST/MA0138.2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTTTCAGCACCAG----------
--TTCAGCACCATGGACAGCGCC
 C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTTTCAGCACCAG--
-----NNCACCTGNN
 C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TTTTCAGCACCAG--
------NCACCTGTN
 C G A T G A C T A C G T C G A T A G T C C G T A C T A G A G T C C G T A A G T C A G T C C G T A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T