Information for 3-AAAAAAAAAAAAAACA (Motif 6)

C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
Reverse Opposite:
C A G T C A T G C A G T C G A T C A G T A C G T A C G T A C G T C A G T A G C T C G A T C A G T A C G T C G A T C A G T C G A T
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.647
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif1371.5
Percentage of Background Sequences with motif2.80%
Average Position of motif in Targets49.1 +/- 23.3bp
Average Position of motif in Background49.4 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAAAAAACA
GTTAAAAAAAAAAATTA--
 A C G T A C G T A C G T C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAAAAAACA
GTTCAAAAAAAAAATTC-
 A C G T A C G T C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAAAAAACA
AACAAACAACAAGAG---
 A C G T A C G T C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAACA
---AAACAAACATTC-
 C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAAAAAACA
TACTGGAAAAAAAA-------
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAAAAAACA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAACA
AAATAAGAAAAAAC--
 C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAAAAAACA
AGCCGAAAAAAAAAT-----
 A C G T A C G T A C G T A C G T C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAAAAAACA
ATATCAAAACAAAACA--
 A C G T A C G T C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAACA
CAAACAACAACACCT-
 C G T A G T C A G C T A G T C A G C T A G C T A C T G A G T C A T C G A G T C A T G C A G C T A G C T A G C T A G T A C G T C A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T