Information for 1-TGTGTCACAT (Motif 5)

C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T
Reverse Opposite:
C T G A A G C T A C T G A C G T A C T G C G T A A G T C G T C A A G T C C G T A
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.855
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.79%
Number of Background Sequences with motif96.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets51.7 +/- 25.4bp
Average Position of motif in Background52.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS::JUN/MA0099.2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGTGTCACAT
TGAGTCA---
 C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGTGTCACAT---
--GGTCACATGAC
 C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TGTGTCACAT---
---GTCACATGAY
 C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGTGTCACAT---
--GGTCACGTGGC
 C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGTGTCACAT
AGGTGTGAAM-
 A C G T C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTCACAT
NATGAGTCACC-
 A C G T A C G T C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGTGTCACAT
--TGTCANYT
 C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

JUND/MA0491.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTCACAT
NATGAGTCACN-
 A C G T A C G T C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGTGTCACAT-
ATTGATGAGTCACCAA
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T A C G T
T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTCACAT
GATGAGTCAT--
 A C G T A C G T C G A T A C T G C A G T A C T G C G A T T A G C C G T A A G T C C T G A A G C T
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T