Information for 21-CGGAKCACGTGCG (Motif 40)

A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
Reverse Opposite:
G A T C A C T G A T G C G T C A A T G C A T C G A C G T A C T G T G C A A G C T A G T C A G T C T A C G
p-value:1e-4
log p-value:-1.071e+01
Information Content per bp:1.700
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets78.8 +/- 9.6bp
Average Position of motif in Background51.6 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0043.1_Max_1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGGAKCACGTGCG--
CCNNANCACGTGGTCN
 A C G T A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGGAKCACGTGCG
--NGKCACGTGM-
 A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
A C G T A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T

Id2/MA0617.1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGGAKCACGTGCG
----TCACGTGC-
 A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
A C G T A C G T A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGGAKCACGTGCG
---GTCACGTGAN
 A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
A C G T A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGAKCACGTGCG
--NNCCACGTGG-
 A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
A C G T A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGAKCACGTGCG
--GGTCACGTGC-
 A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGGAKCACGTGCG
---ACCACGTG--
 A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGGAKCACGTGCG
---ACCACGTGCT
 A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
A C G T A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGGAKCACGTGCG
---ACCACGTGCC
 A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
A C G T A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGGAKCACGTGCG
--GGTCACGTGA-
 A G T C T A C G A C T G T C G A A C G T T A G C G T C A A T G C A T C G C A G T A T C G T A G C C A T G
A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T