Information for 6-GACAGAACACACC (Motif 9)

C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C
Reverse Opposite:
A C T G A T C G A C G T A T C G A C G T A C T G A C G T A G C T A G T C A C G T A C T G A C G T A G T C
p-value:1e-9
log p-value:-2.290e+01
Information Content per bp:1.815
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.2 +/- 23.3bp
Average Position of motif in Background50.0 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACAGAACACACC
CCAGGAACAG---
 C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GACAGAACACACC-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GACAGAACACACC---
----GGACACACCCCC
 C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACAGAACACACC---
AGCGGCACACACGCAA
 C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GACAGAACACACC-
AAAAATAACAAACGG
 A C G T C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GACAGAACACACC
---GGAACAAAGR
 C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GACAGAACACACC
-AAAGATCAAAGG
 C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GACAGAACACACC
--AAGGTCAC---
 C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GACAGAACACACC---
----GGCCACACCCAN
 C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GACAGAACACACC
ATGTCACAACAACAC
 A C G T A C G T C T A G T G C A G T A C C G T A T A C G C T G A G T C A A G T C C G T A T A G C C G T A A T G C G T A C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C