Information for 1-CTGACGGWGA (Motif 3)

A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A
Reverse Opposite:
G C A T A G T C G C A T A G T C A G T C C A T G A G C T A T G C C T G A A T C G
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.778
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif214.3
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets47.3 +/- 32.3bp
Average Position of motif in Background52.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGACGGWGA-----
NNNACCGAGAGTNNN
 A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTGACGGWGA--
GAATGACGAATAAC
 A C G T A C G T A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGACGGWGA
-TGACGT---
 A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A
A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGACGGWGA
ATGACGTA--
 A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGACGGWGA
TTGACAG---
 A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGACGGWGA-----
TTGACCGAGAATTCC
 A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGACGGWGA-----
GNNACCGAGAATNNN
 A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGACGGWGA
TTGACAGC--
 A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGACGGWGA---
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTGACGGWGA
----TGGGGA
 A T G C A G C T A T C G C T G A G T A C C T A G A C T G C G T A C T A G C G T A
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A