p-value: | 1e-7 |
log p-value: | -1.807e+01 |
Information Content per bp: | 1.846 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 2.46% |
Number of Background Sequences with motif | 242.7 |
Percentage of Background Sequences with motif | 0.51% |
Average Position of motif in Targets | 41.7 +/- 24.7bp |
Average Position of motif in Background | 52.0 +/- 29.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGGTGGCAGA-- AGGTGHCAGACA |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGGTGGCAGA--- AGGTGNCAGACAG |
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Hic1/MA0739.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGGTGGCAGA GGTTGGCAT- |
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ZBTB7C/MA0695.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CGGTGGCAGA NTCGGTGGTCGC |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGGTGGCAGA- -VBTGWCAGCB |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGGTGGCAGA -CTTGGCAA- |
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PB0010.1_Egr1_1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CGGTGGCAGA ANTGCGGGGGCGGN |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CGGTGGCAGA-- NGTAGGTTGGCATNNN |
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ZBTB7B/MA0694.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CGGTGGCAGA TTCGGTGGTCGC |
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ZBTB7A/MA0750.1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CGGTGGCAGA- TCGGTGGTCGCN |
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