Information for 4-GAAGGACTTCVCACDT (Motif 4)

C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T
Reverse Opposite:
C G T A G A C T A C T G A C G T A C T G A C T G C T A G G T C A C G T A C T A G C A G T A T G C T A G C A C G T A C G T A G T C
p-value:1e-13
log p-value:-3.058e+01
Information Content per bp:1.761
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.5 +/- 14.5bp
Average Position of motif in Background86.0 +/- 1.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBR1/MA0802.1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GAAGGACTTCVCACDT
------TTTCACACCT
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GAAGGACTTCVCACDT-
------CTTCACACCTA
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GAAGGACTTCVCACDT-
-------TTCACACCTT
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAAGGACTTCVCACDT-
----NTTTTCACACCTT
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GAAGGACTTCVCACDT-
-------TTMACACCTT
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GAAGGACTTCVCACDT-
------TTTCACACCTN
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GAAGGACTTCVCACDT
------KTTCACACCT
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GAAGGACTTCVCACDT
------ATTAACACCT
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAAGGACTTCVCACDT----
---NNTTTTCACACCTTNNN
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GAAGGACTTCVCACDT
-----HTTTCCCASG-
 C T A G C G T A C G T A A T C G A T C G G T C A A G T C A C G T A C G T A G T C T A G C A G T C G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T