Information for 13-NBCBVAAANVVVV (Motif 26)

T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C
Reverse Opposite:
A T C G A G T C A G T C A T C G A G T C C G A T C A G T A G C T A C G T T A C G A T C G T C A G A C T G
p-value:1e-4
log p-value:-1.105e+01
Information Content per bp:1.344
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif25.69%
Number of Background Sequences with motif8229.2
Percentage of Background Sequences with motif17.59%
Average Position of motif in Targets50.4 +/- 25.9bp
Average Position of motif in Background49.8 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:NBCBVAAANVVVV
-CCAAAAATAG--
 T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:NBCBVAAANVVVV
KCCAAAAATAGC-
 T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-NBCBVAAANVVVV
NGYCATAAAWCH--
 A C G T T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-NBCBVAAANVVVV
NATGGAAAAN----
 A C G T T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:NBCBVAAANVVVV
DCYAAAAATAGM-
 T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

SPIC/MA0687.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:NBCBVAAANVVVV----
---AAAAAGAGGAAGTA
 T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:NBCBVAAANVVVV
--RACAAWGG---
 T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:NBCBVAAANVVVV
-ACTGAAACCA--
 T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--NBCBVAAANVVVV
ATGCTAAAAATAGAA
 A C G T A C G T T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0186.1_Tcf3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-NBCBVAAANVVVV-
AGCCGAAAAAAAAAT
 A C G T T G A C A G T C T A G C A T G C T G C A T C G A G C T A C G T A T C A G T A G C T C A G T C A G T A G C A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T