Information for 7-TWTGTCCCGK (Motif 21)

G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G
Reverse Opposite:
T G A C A T G C A C T G C T A G C T A G C G T A A G T C C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.542e+01
Information Content per bp:1.692
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif6.71%
Number of Background Sequences with motif1035.3
Percentage of Background Sequences with motif2.21%
Average Position of motif in Targets50.1 +/- 28.3bp
Average Position of motif in Background52.1 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TWTGTCCCGK
YCTTTGTTCC--
 A C G T A C G T G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TWTGTCCCGK
NCCATTGTTY---
 A C G T A C G T A C G T G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TWTGTCCCGK
ATTGTT----
 G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TWTGTCCCGK
CCATTGTTTT--
 A C G T A C G T G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TWTGTCCCGK
CCATTGTTNY--
 A C G T A C G T G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TWTGTCCCGK
CCTTTGTTTT--
 A C G T A C G T G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TWTGTCCCGK--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TWTGTCCCGK
CCWTTGTYYB--
 A C G T A C G T G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TWTGTCCCGK--
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TWTGTCCCGK
NCCATTGTTC---
 A C G T A C G T A C G T G C A T C G A T A C G T C T A G A C G T A G T C A G T C G T A C A T C G A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T