Information for 4-CCGGAGGGAGAAC (Motif 10)

A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
Reverse Opposite:
A T C G A G C T A C G T A T G C A G C T G T A C A G T C A G T C G A C T A G T C G T A C C T A G A C T G
p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.840
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.8 +/- 14.7bp
Average Position of motif in Background63.5 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCGGAGGGAGAAC
ATTCCCTGAGGGGAA--
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCGGAGGGAGAAC
ATTGCCTGAGGCGAA--
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCGGAGGGAGAAC
WTGSCCTSAGGS-----
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCGGAGGGAGAAC
ATTGCCTGAGGCAAT--
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCGGAGGGAGAAC
--GGAGGGGGAA-
 A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCGGAGGGAGAAC
ATGCCCTGAGGC-----
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGGAGGGAGAAC
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGGAGGGAGAAC
NGCCTGAGGCN----
 A C G T A C G T A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCGGAGGGAGAAC
CCCCCCCGGGGGGGT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCGGAGGGAGAAC
CACCCCCGGGGGGG---
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C T G A A C T G A C T G A C T G C T G A A T C G C G T A C T G A A T G C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T