Information for 4-AAACTAGCAGAGC (Motif 4)

C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
Reverse Opposite:
A T C G A G T C C G A T G T A C G A C T C A T G A T G C C G A T T G C A C A T G A C G T C G A T A G C T
p-value:1e-10
log p-value:-2.425e+01
Information Content per bp:1.718
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif38.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets48.4 +/- 14.1bp
Average Position of motif in Background48.6 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AAACTAGCAGAGC
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAACTAGCAGAGC
DCYAAAAATAGM-----
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAACTAGCAGAGC
GCTAAAAATAGC-----
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAACTAGCAGAGC
CCAAAAATAG------
 A C G T A C G T A C G T C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAACTAGCAGAGC
KCCAAAAATAGC-----
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAACTAGCAGAGC------
VAAACYKGTHWAACMRGTTT
 A C G T C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AAACTAGCAGAGC
AAATTAGCATAAT
 C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAACTAGCAGAGC
GAAAAAATTGCAAGG-
 A C G T A C G T A C G T C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AAACTAGCAGAGC
AGGTTAATTAGCTGAT-
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAACTAGCAGAGC
--ATTTGCATA--
 C T G A C G T A C G T A G T A C A C G T G C T A A T C G G A T C C T G A A C T G C G T A C T A G A T G C
A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T