Information for 11-GGCAGGTCTCAGC (Motif 20)

A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C
Reverse Opposite:
A C T G A G T C A C G T A T C G C G T A A C T G C G T A A G T C A G T C A C G T A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.6 +/- 21.0bp
Average Position of motif in Background57.8 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGTCTCAGC
TGACAGGTGTCA--
 A C G T A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGTCTCAGC
TGACAGGTGTCA--
 A C G T A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCAGGTCTCAGC--
AGGATGACTCAGCAC
 A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C A C G T A C G T
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGCAGGTCTCAGC--
---ATGACTCAGCAD
 A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C A C G T A C G T
A C G T A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

TGIF2/MA0797.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGTCTCAGC
TGACAGCTGTCA--
 A C G T A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCAGGTCTCAGC-
--GATGACTCAGCA
 A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C A C G T
A C G T A C G T T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCAGGTCTCAGC---
--CAGGCCNNGGCCNN
 A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TGIF1/MA0796.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCAGGTCTCAGC
TGACAGCTGTCA--
 A C G T A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C
G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCAGGTCTCAGC
AACAGGTGT----
 A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGCAGGTCTCAGC-----
---ATGACTCAGCANWWT
 A C T G A C T G A G T C C G T A A C T G A C T G G C A T A G T C A C G T A T G C C G T A T C A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T