Information for 10-CAHTGCATTTATATCA (Motif 10)

A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T C A A C G T G T C A A C G T G T C A C G T A C G T A A C G T A C T G A T G C C T G A C A G T A C G T A C T G
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.814
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 19.1bp
Average Position of motif in Background47.4 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAHTGCATTTATATCA--
----ACATTCATGACACG
 A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAHTGCATTTATATCA
NNCATTCATTCATNNN-
 A C G T A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAHTGCATTTATATCA
NNNNNNCTTTTATAN--
 A C G T A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAHTGCATTTATATCA
AATCGCACTGCATTCCG----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAHTGCATTTATATCA
NNNNNNCTTTTATAN--
 A C G T A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAHTGCATTTATATCA
---ANCGTTTANN---
 A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAHTGCATTTATATCA-
GACCACATTCATACAAT
 A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Barhl1/MA0877.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAHTGCATTTATATCA
---NNCAATTANN---
 A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A
A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CAHTGCATTTATATCA
------ATTGATTYND
 A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAHTGCATTTATATCA
----GCACTTAA----
 A G T C G T C A G C T A A G C T A T C G G T A C C G T A A C G T A C G T C A G T C G T A A C G T G T C A A C G T A G T C C G T A
A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T