Information for 8-CATCCCGCTCAGC (Motif 14)

A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G C G T A A C T G A G T C C T A G A C T G A T C G G T C A A C G T A C T G
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 28.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATCCCGCTCAGC-
NNAGTCCCACTCNNNN
 A C G T A C G T A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CATCCCGCTCAGC
---CCTGCTGAGH
 A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CATCCCGCTCAGC-----
-------GTCAGCANNTN
 A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CATCCCGCTCAGC
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CATCCCGCTCAGC------
----CCACACAGCAGGAGA
 A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CATCCCGCTCAGC
ACATCCTGNT----
 A C G T A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATCCCGCTCAGC
CCCCCTGCTGTG-
 A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CATCCCGCTCAGC------
----CCACACAGCAGGAGA
 A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CATCCCGCTCAGC
NCTTCCCGCCC---
 A C G T A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CATCCCGCTCAGC
NNTTCCCGCCC---
 A C G T A G T C C G T A A C G T A T G C A G T C A G T C A C T G A G T C A C G T A G T C C G T A A C T G A G T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T