Information for 3-GCTGATGCTCCCTCTG (Motif 2)

T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C G T C A A C T G C G T A A C T G A C T G A C T G G T C A A C T G A G T C G T C A C G A T A T G C C G T A A C T G A G T C
p-value:1e-13
log p-value:-3.081e+01
Information Content per bp:1.916
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 19.3bp
Average Position of motif in Background72.8 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCTGATGCTCCCTCTG
------GCTCCG----
 T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTGATGCTCCCTCTG
--CNGTCCTCCC----
 T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTGATGCTCCCTCTG
AGATGCTRCTRCCHT--
 A C G T T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTGATGCTCCCTCTG
-CAGCTGTTTCCT---
 T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCTGATGCTCCCTCTG-----
-CNNBRGCGCCCCCTGSTGGC
 T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCTGATGCTCCCTCTG------
--GCCTCCTCCMTCWGACTGKS
 T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.49
Offset:8
Orientation:forward strand
Alignment:GCTGATGCTCCCTCTG--
--------GCCATCTGTT
 T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:forward strand
Alignment:GCTGATGCTCCCTCTG--
--------ACCATCTGTT
 T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCTGATGCTCCCTCTG
GCTCGGSCTC------
 T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GCTGATGCTCCCTCTG
-----NCTTCCCGCCC
 T C A G A G T C A C G T A T C G C G T A A C G T A C T G A G T C A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C