Information for 6-RTGTGTGTGTTTA (Motif 9)

C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A
Reverse Opposite:
A G C T C G T A G C T A C G T A G A T C C G T A A G T C C G T A A T G C C G T A G T A C C T G A A G T C
p-value:1e-5
log p-value:-1.209e+01
Information Content per bp:1.780
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.89%
Number of Background Sequences with motif40.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets52.8 +/- 29.4bp
Average Position of motif in Background41.6 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----RTGTGTGTGTTTA
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-RTGTGTGTGTTTA--
NNNNTTTGTTTACNNT
 A C G T C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:RTGTGTGTGTTTA---
----NTGTTTAYATWW
 C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RTGTGTGTGTTTA-
---TGTGGATTNNN
 C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RTGTGTGTGTTTA----
--CTTTGTTTACTTTTN
 C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RTGTGTGTGTTTA------
--NNNTTTGTTTACNTTNN
 C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RTGTGTGTGTTTA------
--NNNTTTGTTTACNTTNN
 C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RTGTGTGTGTTTA
GTCTGTGGTTT--
 C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:RTGTGTGTGTTTA--
---CBTGTTTAYAWW
 C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

PB0198.1_Zfp128_2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RTGTGTGTGTTTA--
-TGTATATATATACC
 C T A G A G C T A C T G A C G T A T C G A C G T A C T G A C G T C A T G A C G T C G A T C G A T C T G A A C G T A C G T
A C G T C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C