Information for 5-TTCTCTTGWTGGGTGG (Motif 5)

A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G
Reverse Opposite:
G A T C A T G C C G T A A G T C T G A C T G A C C G T A C G A T T A G C T C G A C T G A A C T G C T G A T C A G G T C A C T G A
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.615
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif5.37%
Number of Background Sequences with motif69.9
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets50.7 +/- 25.4bp
Average Position of motif in Background44.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTCTCTTGWTGGGTGG
-TCNCCTGCTGNGNNN
 A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTCTCTTGWTGGGTGG
-TNTCCTGCTGTGNNG
 A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TTCTCTTGWTGGGTGG------
-----GTATTGGGTGGGTAATT
 A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TTCTCTTGWTGGGTGG---
-------CGTGGGTGGTCC
 A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

GLIS3/MA0737.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTCTCTTGWTGGGTGG--
----CTTCGTGGGGGGTC
 A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.52
Offset:12
Orientation:reverse strand
Alignment:TTCTCTTGWTGGGTGG--
------------GTGGAT
 A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTCTCTTGWTGGGTGG
-CCCCCTGCTGTG---
 A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:TTCTCTTGWTGGGTGG----
--------NTCGGTGGTCGC
 A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TTCTCTTGWTGGGTGG
-NNTCCTGCTGTGNNN
 A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCTTGWTGGGTGG
NNNNNATTGATGNGTGN
 A C G T A G C T A C G T A G T C A G C T G T A C G A C T A G C T A C T G G C T A G C A T A C T G A C T G T A C G G A C T A T C G C T A G
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A