Information for 9-TCAGCACCAGGGCCGA (Motif 10)

A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A
Reverse Opposite:
C G A T A T G C C T A G A T C G A G T C A G T C A G T C A C G T A C T G A C T G A C G T A T C G A G T C A C G T A C T G G T C A
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.831
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 29.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCAGCACCAGGGCCGA----
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCAGCACCAGGGCCGA----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCACCAGGGCCGA
NNAGGGACAAGGGCNC-
 A C G T A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCAGCACCAGGGCCGA
---GCCTCAGGGCAT-
 A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCAGCACCAGGGCCGA
--TGCCCCAGGGCA--
 A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A
A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCAGCACCAGGGCCGA
--GTCCCCAGGGGA--
 A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCAGCACCAGGGCCGA
-CAGGCCNNGGCCNN-
 A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCAGCACCAGGGCCGA
--TGCCCCAGGGCA--
 A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCAGCACCAGGGCCGA
--TGCCCNGGGGCA--
 A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCAGCACCAGGGCCGA
CCAGGAACAG------
 A C G T A G T C C G T A A C T G A T G C G T C A G T A C A G T C C G T A A C T G A C T G A C T G A T G C A G T C A T C G C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T