Information for 1-ATAGCTTTGT (Motif 6)

C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C G T
p-value:1e-12
log p-value:-2.822e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 16.1bp
Average Position of motif in Background77.4 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:ATAGCTTTGT
----CTTTGT
 C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ATAGCTTTGT---
---CCWTTGTYYB
 C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ATAGCTTTGT---
---YCTTTGTTCC
 C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATAGCTTTGT---
---CCTTTGTTTT
 C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATAGCTTTGT------
ANTCCTTTGTCTNNNN
 C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATAGCTTTGT
AGGVNCCTTTGT
 A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATAGCTTTGT-
AACAATAACATTGTT
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATAGCTTTGT-
---CCWTTGTY
 C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATAGCTTTGT
AAGATATCCTT--
 A C G T A C G T A C G T C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATAGCTTTGT---
---CCATTGTTTT
 C G T A A C G T C G T A A C T G A G T C A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T