Information for 1-MRSCTRTGGGCAG (Motif 5)

G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C A G T C C G T A A G C T C G T A A C T G A T C G A G C T A C G T
p-value:1e-13
log p-value:-3.055e+01
Information Content per bp:1.876
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.6 +/- 22.7bp
Average Position of motif in Background61.9 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-MRSCTRTGGGCAG
TCACCTCTGGGCAG
 A C G T G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:MRSCTRTGGGCAG
----TNNGGGCAG
 G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-MRSCTRTGGGCAG
CCGCCCAAGGGCAG
 A C G T G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:MRSCTRTGGGCAG
----NGTGGGCAT
 G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MRSCTRTGGGCAG
TGCCCNGGGGCA-
 G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MRSCTRTGGGCAG----
-NNNNTTGGGCACNNCN
 G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MRSCTRTGGGCAG
-GCCTCAGGGCAT
 G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:MRSCTRTGGGCAG
TGCCCCAGGGCA-
 G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:MRSCTRTGGGCAG
TGCCCCAGGGCA-
 G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-MRSCTRTGGGCAG
TTGCCCTAGGGCAT
 A C G T G T C A C T G A A T G C A G T C A C G T C T G A A C G T A C T G A C T G C T A G A G T C C G T A A C T G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T