p-value: | 1e-1 |
log p-value: | -3.991e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 0.46% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 57.7 +/- 26.1bp |
Average Position of motif in Background | 64.9 +/- 3.5bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 3.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0134.1_Pbx1/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAACCATCA------- TCACCCATCAATAAACA |
|
|
|
PB0172.1_Sox1_2/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTAACCATCA--- NNNTAACAATTATAN |
|
|
|
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTAACCATCA- -AAACMATTAN |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTAACCATCA- GYCATCMATCAT |
|
|
|
MF0009.1_TRP(MYB)_class/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTAACCATCA --AACCGANA |
|
|
|
Sox5/MA0087.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTAACCATCA -NAACAAT-- |
|
|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTAACCATCA-- --GGCCATTAAC |
|
|
|
PBX1/MA0070.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAACCATCA-- CCATCAATCAAA |
|
|
|
Dux/MA0611.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTAACCATCA- ---CCAATCAA |
|
|
|
SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTAACCATCA NNACTTACCTN-- |
|
|
|