Information for 18-AATCCTGCTGAGGGAC (Motif 40)

C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
Reverse Opposite:
C T A G A C G T A G T C A G T C A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G A T C G G T C A A C G T C G A T
p-value:1e-4
log p-value:-1.005e+01
Information Content per bp:1.903
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.5 +/- 7.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATCCTGCTGAGGGAC
TNTCCTGCTGTGNNG-
 C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AATCCTGCTGAGGGAC
---CCTGCTGAGH---
 C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATCCTGCTGAGGGAC
CCCCCTGCTGTG----
 C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AATCCTGCTGAGGGAC
TCNCCTGCTGNGNNN-
 C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AATCCTGCTGAGGGAC
NNTCCTGCTGTGNNN-
 C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AATCCTGCTGAGGGAC
-----TGCTGACTCA-
 C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AATCCTGCTGAGGGAC
GGCCYCCTGCTGDGH---
 A C G T A C G T C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATCCTGCTGAGGGAC
-AATTTGCTGAC----
 C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATCCTGCTGAGGGAC
-AAAATGCTGACT---
 C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AATCCTGCTGAGGGAC
----HTGCTGAGTCAT
 C G T A C G T A A C G T A T G C G T A C A C G T A C T G A G T C A C G T A C T G C G T A C T A G A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T