Information for 11-TGCACAGATC (Motif 30)

G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C
Reverse Opposite:
A C T G C T G A A G C T T G A C A C G T A T C G C G A T T A C G A G T C C G T A
p-value:1e-6
log p-value:-1.600e+01
Information Content per bp:1.731
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif6.42%
Number of Background Sequences with motif247.0
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets39.3 +/- 27.4bp
Average Position of motif in Background52.3 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGCACAGATC
--CACAGN--
 G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGCACAGATC
CCAGGAACAG---
 A C G T A C G T A C G T G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGCACAGATC---
GGATTGACAGGTCNTT
 A C G T A C G T A C G T G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCACAGATC--
--AACAGATGGT
 G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C A C G T A C G T
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGCACAGATC-
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCACAGATC---
CGAAGCACACAAAATA
 A C G T A C G T A C G T G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCACAGATC---
NTATTGACAGGTNNTN
 A C G T A C G T A C G T G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCACAGATC---
NTATTGACAGCTNNTT
 A C G T A C G T A C G T G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCACAGATC-
---ACATATGG
 G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------TGCACAGATC
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A T G C C G T A A T G C C G T A A C T G T C G A A G C T A G T C
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G