Information for 15-TGTYAATGTCTGA (Motif 27)

A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A
Reverse Opposite:
A C G T A G T C G C T A A C T G C G T A A G T C C G T A A C G T A C G T C T A G C G T A A G T C C G T A
p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.920
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.8 +/- 25.2bp
Average Position of motif in Background48.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTYAATGTCTGA-----
-NNTNNTGTCTGGNNTNG
 A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGTYAATGTCTGA
-----TWGTCTGV
 A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTYAATGTCTGA--
--TTAATGTTTAACC
 A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGTYAATGTCTGA
-GTTAATGGCC--
 A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGTYAATGTCTGA
-----CTGTCTGG
 A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGTYAATGTCTGA-
----AAGGTGTGAA
 A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

HNF1B/MA0153.2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTYAATGTCTGA-
-GTTAATGATTAAC
 A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A A C G T
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTYAATGTCTGA--
NGTTAATNATTAACN
 A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTYAATGTCTGA-
ACTATGAATGAATGAT
 A C G T A C G T A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TGTYAATGTCTGA
NNNCAGCTGTCAATATN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T G A C T C G T A C G T A A C G T A C T G C G A T G T A C C A G T A C T G C G T A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T