Information for 15-GCAGTRTGGT (Motif 22)

A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T
Reverse Opposite:
G T C A G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G A T G C
p-value:1e-6
log p-value:-1.399e+01
Information Content per bp:1.870
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif71.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets38.7 +/- 25.9bp
Average Position of motif in Background45.2 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCAGTRTGGT---
-CAGTGTGGTCGC
 A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCAGTRTGGT---
-NNHTGTGGTTWN
 A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCAGTRTGGT---
---CTGTGGTTTN
 A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTRTGGT-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCAGTRTGGT--
--GCTGTGGTTT
 A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCAGTRTGGT--
-GTCTGTGGTTT
 A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAGTRTGGT--
--NNTGTGGTTT
 A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTRTGGT--
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

Neurog1/MA0623.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGTRTGGT
ACCATATGGT
 A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAGTRTGGT
-CTGTCTGG-
 A T C G A T G C C G T A C T A G A C G T C T A G A C G T A C T G A C T G A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T