Information for 9-GTYAGTTTTGRSW (Motif 19)

A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A
Reverse Opposite:
C G A T A T C G A G T C A G T C C G T A C G T A C G T A C G T A T A G C A C G T C T G A C G T A A G T C
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.872
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 26.6bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTYAGTTTTGRSW
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTYAGTTTTGRSW---
-TNAGTTTCGATTTTN
 A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A A C G T A C G T A C G T
A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTYAGTTTTGRSW---
-NTGGTTTCGGTTNNN
 A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A A C G T A C G T A C G T
A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTYAGTTTTGRSW-
TTCTATTTTTAGNNN
 A C G T A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTYAGTTTTGRSW
GCTATTTTTAGC-
 A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTYAGTTTTGRSW
KCTATTTTTRGH-
 A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTYAGTTTTGRSW--
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTYAGTTTTGRSW--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTYAGTTTTGRSW
GCTATTTTTGGM-
 A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTYAGTTTTGRSW
TGGCAGTTGN----
 A C G T A C T G A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T