Information for 11-TCTGTGGTCA (Motif 16)

A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A
Reverse Opposite:
A C G T T C A G T C G A A T G C A T G C G C T A A G T C C G T A T A C G C T G A
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.810
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif394.3
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets50.2 +/- 28.6bp
Average Position of motif in Background50.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TCTGTGGTCA
GCTGTGGTTT
 A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TCTGTGGTCA
GTCTGTGGTTT
 A C G T A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TCTGTGGTCA-
NNHTGTGGTTWN
 A C G T A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TCTGTGGTCA-
-CTGTGGTTTN
 A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TCTGTGGTCA-----
NTNNNGGGGTCANGNNN
 A C G T A C G T A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCTGTGGTCA
NNTGTGGTTT
 A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TCTGTGGTCA
--TRAGGTCA
 A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCTGTGGTCA
--AGRGGTCA
 A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCTGTGGTCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCTGTGGTCA
TTTGCGGTTT
 A G C T A T G C C G A T A C T G C G A T A T C G A T C G A G C T A G T C C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T