Information for 16-TAATGGTATT (Motif 33)

A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A G T C A G T C C G T A A C G T A C G T C T G A
p-value:1e-6
log p-value:-1.408e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.0 +/- 14.5bp
Average Position of motif in Background60.0 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TAATGGTATT--
TAATTNVATTAN
 A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

Sox1/MA0870.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TAATGGTATT---
AACAATGNTATTGTT
 A C G T A C G T A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGTATT
NTAATKGTTT-
 A C G T A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TAATGGTATT-
CCTTAATNGNTTTT
 A C G T A C G T A C G T A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TAATGGTATT-
YTAATYNRATTA
 A C G T A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGTATT-
GTAATCDGATTA
 A C G T A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TAATGGTATT-
TAATTAAATTA
 A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAATGGTATT---
TTGAATGAAATTCGA
 A C G T A C G T A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PHOX2A/MA0713.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAATGGTATT-
TAATTAAATTA
 A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

BARX1/MA0875.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGTATT
NTAATTGN---
 A C G T A G C T C G T A C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T