Information for 10-GTCAGTGCAGTVHAGG (Motif 17)

A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C A C G T C A G T A C G T G T C A A T G C A C G T A C T G A T G C C G T A A G T C A G C T A C T G C G T A A T G C
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.813
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 22.1bp
Average Position of motif in Background41.9 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCAGTGCAGTVHAGG--
--CAATGCATTGTGGGTA
 A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGCAGTVHAGG-
NNNANTGCAGTGCNNTT
 A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGTGCAGTVHAGG
NNGTATGTGCACATNNN-
 A C G T A C G T A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGTGCAGTVHAGG
RGTTAGTGCCCY-----
 A C G T A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGTGCAGTVHAGG
NTNTATGTGCACATNNN-
 A C G T A C G T A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GTCAGTGCAGTVHAGG
CGAACAGTGCTCACTAT-
 A C G T A C G T A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGCAGTVHAGG
TTAAGTGC--------
 A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GTCAGTGCAGTVHAGG
WDNCTGGGCA-------
 A C G T A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGCAGTVHAGG
TTAAGTGCTT------
 A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---GTCAGTGCAGTVHAGG
TAATTCAATGAAGTG----
 A C G T A C G T A C G T A T C G A C G T A G T C C T G A A C T G A C G T A T C G A G T C C G T A A T C G A C G T T C G A G C T A C G T A A C T G A C T G
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G A C G T A C G T A C G T A C G T