Information for 1-ATATATATTTAAT (Motif 5)

G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T
Reverse Opposite:
G C T A A C G T C A G T C G T A G T C A G C T A G C A T G C T A G C A T T G C A A C G T C T G A C G A T
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.755
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif146.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets37.2 +/- 23.9bp
Average Position of motif in Background47.5 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.70
Offset:7
Orientation:reverse strand
Alignment:ATATATATTTAAT
-------TTTAAT
 G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATATATATTTAAT-
ATGAATAATTAATG
 G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F3/MA0791.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATATATATTTAAT---
ATGCATAATTAATGAG
 G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T A C G T A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

POU4F2/MA0683.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATATATATTTAAT---
ATGCATAATTAATGAG
 G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T A C G T A C G T A C G T
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

Hoxd8/MA0910.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATATATATTTAAT-----
-TAAATAATTAATGGCTA
 G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATATATATTTAAT-----
-TAAATAATTAATGGCTA
 G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

Lhx3/MA0135.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATATATATTTAAT--
--GATTAATTAATTT
 G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T A C G T A C G T
A C G T A C G T T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

PH0095.1_Lhx5/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATATATATTTAAT---
ANNATTTAATTAATTNN
 A C G T G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATATATATTTAAT
NANTTATATATAANGN
 A C G T A C G T A C G T G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PH0093.1_Lhx3/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATATATATTTAAT---
NNTATTTAATTAATTNN
 A C G T G C T A G A C T G T C A A C G T C G T A C G A T C G T A C A G T A C G T C G A T G C T A C G T A C G A T A C G T A C G T A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C