Information for 9-CCATAACTTT (Motif 25)

A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T
Reverse Opposite:
C G T A G C T A C G T A A C T G G C A T A G C T T C G A C G A T C T A G A C T G
p-value:1e-6
log p-value:-1.443e+01
Information Content per bp:1.838
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif182.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets49.9 +/- 29.4bp
Average Position of motif in Background47.6 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCATAACTTT
AAGATATCCTT
 A C G T A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCATAACTTT-
--TTGACTTTT
 A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T A C G T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCATAACTTT---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CCATAACTTT-
ATGGTTCAATAATTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

HSF2/MA0770.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCATAACTTT-
TTCTAGAACGTTC
 A C G T A C G T A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T A C G T
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCATAACTTT-
TTCTAGAACGTTC
 A C G T A C G T A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T A C G T
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCATAACTTT---
AACAATAACATTGTT
 A C G T A C G T A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T A C G T A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCATAACTTT---
TTCTAGAABNTTCTA
 A C G T A C G T A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T A C G T A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF4/MA0771.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCATAACTTT-
TTCTAGAACGTTC
 A C G T A C G T A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T A C G T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCATAACTTT---
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G C T C T G A C G T A A G T C C G A T C G A T A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T