Information for 11-CGAGCTTCAAATA (Motif 24)

A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C G T A G T C A C T G
p-value:1e-6
log p-value:-1.506e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.7 +/- 14.1bp
Average Position of motif in Background77.3 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGAGCTTCAAATA
-CGGTTTCAAA--
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGAGCTTCAAATA-
----CCAAAAATAG
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGAGCTTCAAATA--
---GCTAAAAATAGC
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGAGCTTCAAATA
---NATTCAAAT-
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGAGCTTCAAATA--
---DCYAAAAATAGM
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGAGCTTCAAATA---
-ATGCTAAAAATAGAA
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGAGCTTCAAATA--
---GCTATAAATAGC
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGAGCTTCAAATA--
---TCTAAAAATAGA
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGAGCTTCAAATA--
---ACTATAAATAGA
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGAGCTTCAAATA--
---KCCAAAAATAGC
 A G T C A C T G C G T A A C T G A G T C A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C