Information for 9-GTGGGACATAATTAAA (Motif 21)

A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A
Reverse Opposite:
A C G T C A G T C G A T G T C A C G T A C A G T A C G T G T C A A C G T A T C G C G A T G A T C G A T C A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.656
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif178.2
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets46.5 +/- 25.2bp
Average Position of motif in Background47.6 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

mix-a/MA0621.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GTGGGACATAATTAAA-
------NCTAATTAANN
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GTGGGACATAATTAAA--
---TATCATAATTAAGGA
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A A C G T A C G T
A C G T A C G T A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

MNX1/MA0707.1/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GTGGGACATAATTAAA
------GGTAATTAAA
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A

LMX1B/MA0703.1/Jaspar

Match Rank:4
Score:0.63
Offset:7
Orientation:forward strand
Alignment:GTGGGACATAATTAAA
-------TTAATTAA-
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:5
Score:0.62
Offset:7
Orientation:forward strand
Alignment:GTGGGACATAATTAAA-
-------GCAATAAAAA
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

PB0001.1_Arid3a_1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTGGGACATAATTAAA----
---GGGTTTAATTAAAATTC
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTGGGACATAATTAAA----
----TAGGTAATAAAATTCA
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

LMX1A/MA0702.1/Jaspar

Match Rank:8
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GTGGGACATAATTAAA
-------TTAATTAA-
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.61
Offset:10
Orientation:forward strand
Alignment:GTGGGACATAATTAAA
----------ATTAAA
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGGGACATAATTAAA---
-WNAGTCADAVTGAAACTN
 A C T G G A C T C T A G C A T G C T A G C G T A T A G C C G T A C A G T G T C A G C T A C G A T C A G T C G T A G C T A T C G A A C G T A C G T A C G T
A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G