Information for 8-MTTTTATGTGGCAGGA (Motif 18)

G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A
Reverse Opposite:
G A C T G T A C A T G C A C G T C A T G A T G C G T A C C G T A G T A C C G T A A G C T G T C A G C T A G T C A C G T A A C T G
p-value:1e-8
log p-value:-1.883e+01
Information Content per bp:1.708
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.7 +/- 20.4bp
Average Position of motif in Background52.8 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:MTTTTATGTGGCAGGA
-TTTTATKRGG-----
 G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:MTTTTATGTGGCAGGA
NTTTTATTGG------
 G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---MTTTTATGTGGCAGGA
NNTGTTTATTTTGGCA---
 A C G T A C G T A C G T G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:MTTTTATGTGGCAGGA
-TTTTATTRGN-----
 G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:MTTTTATGTGGCAGGA
NTTTTATTGG------
 G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---MTTTTATGTGGCAGGA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:MTTTTATGTGGCAGGA
TTTTTATTGG------
 G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---MTTTTATGTGGCAGGA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---MTTTTATGTGGCAGGA
NNAATTTTATTGGNTN---
 A C G T A C G T A C G T G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-MTTTTATGTGGCAGGA
NNNNTTGTGTGCTTNN-
 A C G T G T A C A C G T A C G T C G A T A C G T C T G A C G A T A C T G G A C T A C T G A T C G G T A C C G T A A T C G C A T G C G T A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T