Information for 2-GATATTCATC (Motif 10)

A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C
Reverse Opposite:
A C T G C G T A C A G T A C T G C G T A C T G A A C G T C G T A C G A T A G T C
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.851
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif87.3
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets53.9 +/- 22.4bp
Average Position of motif in Background49.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GATATTCATC---
NAGATWNBNATCTNN
 A C G T A C G T A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GATATTCATC
GAATATTCAT-
 A C G T A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GATATTCATC
GHATATKCAT-
 A C G T A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GATATTCATC-----
-ACATTCATGACACG
 A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GATATTCATC
CTCATGAATATTCAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GATATTCATC-
-NTATYGATCH
 A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C A C G T
A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GATATTCATC--
-ATATTAATTAA
 A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GATATTCATC
AAGATATCCTT-
 A C G T A C G T A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GATATTCATC----
GACCACATTCATACAAT
 A C G T A C G T A C G T A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GATATTCATC-
RGCCATYAATCA
 A C G T A C T G C G T A C G A T G T C A A G C T A C G T T G A C G T C A A C G T G T A C A C G T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A