Information for 6-CTGCAGGTTT (Motif 9)

G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T
Reverse Opposite:
C G T A T G C A C T G A G T A C A T G C A G C T T C A G T G A C C G T A A C T G
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.826
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif112.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets36.7 +/- 23.4bp
Average Position of motif in Background53.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SNAI2/MA0745.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGCAGGTTT
-AACAGGTGT
 G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGCAGGTTT--
SDGCAGGTGCNS
 G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTT-
-NNCAGGTGNN
 G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGGTTT--
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTGCAGGTTT--
--VCAGGTRDRY
 G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T A C G T A C G T
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTT-
-NNCAGGTGTN
 G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T A C G T
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAGGTTT---
CCTTGCAATTTTTNN
 A C G T A C G T G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTT-
-GACAGGTGTN
 G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T A C G T
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTT-
-NNCAGGTGCG
 G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T A C G T
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGTTT
DCTCAGCAGG---
 A C G T A C G T A C G T G T A C A C G T A C T G A G T C C T G A A T C G A C T G A G C T A C G T G C A T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T