Information for 12-WCWTTTAAAAAGT (Motif 14)

C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
Reverse Opposite:
C G T A G T A C C G A T A G C T A C G T C G A T A C G T C G T A C G T A C G T A C G A T A C T G C G T A
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.848
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.5 +/- 19.5bp
Average Position of motif in Background51.7 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:WCWTTTAAAAAGT
-NATTCAAAT---
 C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-WCWTTTAAAAAGT
CGGTTTCAAA----
 A C G T C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-WCWTTTAAAAAGT
TACTGGAAAAAAAA
 A C G T C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-WCWTTTAAAAAGT
NGCAATTAAA----
 A C G T C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--WCWTTTAAAAAGT--
GTTCAAAAAAAAAATTC
 A C G T A C G T C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----WCWTTTAAAAAGT
NNCATTCATTCATNNN--
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----WCWTTTAAAAAGT
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----WCWTTTAAAAAGT
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Hmx3/MA0898.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----WCWTTTAAAAAGT
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----WCWTTTAAAAAGT
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C G T A C G T G A C T C G T A C G T A C G T A C T G A C G T A A C T G C G A T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T