Information for 4-CAGCCATGARRCTGGA (Motif 8)

T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
Reverse Opposite:
C G A T T G A C A G T C C G T A A T C G A G T C G A T C A G C T A G T C G T C A A C G T A C T G C A T G A G T C C G A T A C T G
p-value:1e-11
log p-value:-2.677e+01
Information Content per bp:1.735
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.5 +/- 20.0bp
Average Position of motif in Background55.6 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGCCATGARRCTGGA
GTGCCACGCGACTG--
 T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAGCCATGARRCTGGA
-AGAAACGAAAGT---
 T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------CAGCCATGARRCTGGA
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCATGARRCTGGA
BCAGACWA---------
 A C G T T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCATGARRCTGGA
CCAGACAG---------
 A C G T T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CAGCCATGARRCTGGA
--GTCATGTGACC---
 T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:7
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CAGCCATGARRCTGGA
-CAGCATGACTCAGCA
 T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
A C G T G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.47
Offset:0
Orientation:forward strand
Alignment:CAGCCATGARRCTGGA
CGGAAGTGAAAC----
 T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.46
Offset:0
Orientation:forward strand
Alignment:CAGCCATGARRCTGGA
CAGCC-----------
 T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCATGARRCTGGA
CCAGACRSVB-------
 A C G T T G A C C G T A A C T G G T A C G T A C G T C A A C G T A C T G C T G A C T A G C T A G A T G C C G A T A C T G A C T G C G T A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T