Information for 5-AAAGGAAATCCCA (Motif 7)

C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G C T A G T A C G C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 27.6bp
Average Position of motif in Background81.4 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:AAAGGAAATCCCA
---GGAAATTCCC
 C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:AAAGGAAATCCCA
---GGAAANCCCC
 C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGAAATCCCA
NACAGGAAAT----
 A C G T C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AAAGGAAATCCCA
---GGAAATTCCC
 C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:AAAGGAAATCCCA
---GGAAATCCCC
 C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AAAGGAAATCCCA-
--GGGAAATCCCCN
 C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAAGGAAATCCCA
NACAGGAAAT----
 A C G T C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAAGGAAATCCCA
-AAGGATATNTN-
 C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGAAATCCCA
NDCAGGAARTNN--
 A C G T C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGGAAATCCCA
AACAGGAAGT----
 A C G T C G T A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A G T C G T C A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T