Information for 11-AAGSGTCATT (Motif 13)

T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T
Reverse Opposite:
C G T A C T G A C G A T C A T G C G T A G T A C T A C G A G T C C G A T A G C T
p-value:1e-9
log p-value:-2.197e+01
Information Content per bp:1.673
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.07%
Number of Background Sequences with motif745.2
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets54.5 +/- 25.3bp
Average Position of motif in Background51.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EMX1/MA0612.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AAGSGTCATT---
---NNTAATTAGN
 T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G

PH0061.1_Hoxb6/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAGSGTCATT-----
TATTGGTAATTACCTT
 A C G T T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AAGSGTCATT---
-----YCATTAMC
 T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

VAX1/MA0722.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAGSGTCATT--
----NTAATTAG
 T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G

VAX2/MA0723.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAGSGTCATT--
----NTAATTAG
 T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAGSGTCATT---
---GGTAATTAGC
 T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

PDX1/MA0132.2/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AAGSGTCATT--
----GTAATTAG
 T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G

HOXB2/MA0902.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AAGSGTCATT---
---AGTAATTAAC
 T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C

EVX1/MA0887.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AAGSGTCATT---
---GGTAATTAGC
 T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AAGSGTCATT--
----GTAATTAA
 T C G A C G T A A C T G A T G C C A T G G C A T G T A C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A