Information for 8-RGRTGTTGYCAKA (Motif 10)

C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C A C G T A C T G C T G A A G T C C G T A C G T A A G T C C G T A A G C T A T G C A G C T
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.5 +/- 25.4bp
Average Position of motif in Background28.0 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN/MA0488.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-RGRTGTTGYCAKA
AAGATGATGTCAT-
 A C G T C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:RGRTGTTGYCAKA
-GGTGYTGACAGS
 C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

JUND(var.2)/MA0492.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--RGRTGTTGYCAKA
AAAGATGATGTCATC
 A C G T A C G T C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RGRTGTTGYCAKA
-NATGTTGCAA--
 C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----RGRTGTTGYCAKA
GCGGAGGTGTCGCCTC-
 A C G T A C G T A C G T A C G T C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-RGRTGTTGYCAKA-
GTNTTGTTGTGANNT
 A C G T C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RGRTGTTGYCAKA
NGATGACGTCAT-
 C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:RGRTGTTGYCAKA
NRRTGACGTCAT-
 C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:RGRTGTTGYCAKA
-----YTGWCADY
 C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RGRTGTTGYCAKA
--ATATTTACATA
 C T G A A T C G C T G A A C G T A C T G A C G T A C G T C T A G A G C T G T A C C G T A A C T G C G T A
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A