Information for 1-NNVRRYCACGTGRYYN (Motif 1)

T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
Reverse Opposite:
C A T G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A G T C A G T C G T A C A G T C
p-value:1e-122
log p-value:-2.830e+02
Information Content per bp:1.540
Number of Target Sequences with motif186.0
Percentage of Target Sequences with motif22.99%
Number of Background Sequences with motif1067.4
Percentage of Background Sequences with motif2.30%
Average Position of motif in Targets51.9 +/- 14.1bp
Average Position of motif in Background47.3 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFEC/MA0871.1/Jaspar

Match Rank:1
Score:0.96
Offset:4
Orientation:forward strand
Alignment:NNVRRYCACGTGRYYN
----ATCACGTGAC--
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T A C G T A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:2
Score:0.95
Offset:4
Orientation:forward strand
Alignment:NNVRRYCACGTGRYYN
----ATCACGTGAC--
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T A C G T A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.95
Offset:4
Orientation:forward strand
Alignment:NNVRRYCACGTGRYYN
----GTCACGTGGT--
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.95
Offset:3
Orientation:forward strand
Alignment:NNVRRYCACGTGRYYN
---GGTCACGTGA---
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.94
Offset:4
Orientation:forward strand
Alignment:NNVRRYCACGTGRYYN
----ATCACGTGAC--
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T A C G T A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:NNVRRYCACGTGRYYN
--NNACCACGTGGT--
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.93
Offset:4
Orientation:forward strand
Alignment:NNVRRYCACGTGRYYN
----GNCACGTG----
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.93
Offset:4
Orientation:forward strand
Alignment:NNVRRYCACGTGRYYN
----GHCACGTG----
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.92
Offset:4
Orientation:forward strand
Alignment:NNVRRYCACGTGRYYN
----ACCACGTG----
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:NNVRRYCACGTGRYYN
---GGTCACATGAC--
 T C A G C A T G T C A G T C A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C G T A C
A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T