Information for 12-AGCTATTAATAGT (Motif 21)

G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T
Reverse Opposite:
C T G A A T G C A C G T C G T A A C G T A C G T C G T A C G T A A C G T C T G A A T C G A G T C C G A T
p-value:1e-8
log p-value:-1.929e+01
Information Content per bp:1.882
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.8 +/- 0.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:AGCTATTAATAGT
-GCTATTTATAGC
 G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T
A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AGCTATTAATAGT
-TCTATTTATAGN
 G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

PH0063.1_Hoxb8/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AGCTATTAATAGT
ACCGGCAATTAATAAA
 A C G T A C G T A C G T G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGCTATTAATAGT
-TCTATTTTTAGA
 G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T
A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGCTATTAATAGT
-GCTAAAAATAGC
 G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Hoxd8/MA0910.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCTATTAATAGT---
NAGCCATTAATTANTTA
 A C G T G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCTATTAATAGT---
NAGCCATTAATTANTTA
 A C G T G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGCTATTAATAGT
-NTAATTAATAT-
 G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T
A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGCTATTAATAGT-
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGCTATTAATAGT-
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T G C T A C T A G A T G C A G C T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G C T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T